Portal
Dr. Jack Min
Professor
Chemical & Biological Sciences
Ward Beecher Hall 3014
phone: (330) 941-1945
Bio
YSU 2008 - present
Education: Ph.D. 1995 University of Hawaii; MSS (Master of Software Systems) 2002 University of British Columbia; MS 1987 China Agricultural University; BS 1984 Qingdao Agricultural University Postdoctoral Research: University of British Columbia (1996-1998); Institute of Physical and Chemical Research (RIKEN), Japan (1998-2000) Work Experience: Research associate - University of British Columbia (2000-2002); Concordia University (2002-2008)
Current Research & Teaching at YSU (2008 - present) Research projects: (1) Bioinformatics software and database development - software tools for DNA sequence analysis and identification of alternatively spliced genes; knowledge database development for secretomes and alternatively spliced genes; (2) Gene and genome annotation and evolutionary analysis. Teaching: BIOL1505: Biology & the Modern World; BIOL2601: General Biology - Molecules and Cells; BIOL3721: Genetics; BIOL3745: Plant Physiology; BIOL4890L: Molecular Genetics Laboratory; BIOL6964: Advanced Molecluar Genetics; BIOL4800: Bioinformatics; BIOL6900: Advanced Bioinformatics; BIOL5858: Computational Bioinformatics
Research Interests
Bioinformatics, Plant Genomics and Physiology
Teaching Interests
Bioinformatics, Plant Physiology, General Biology, etc
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2002
MS, Software Systems
University of British Columbia
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1995
Ph D, Plant Sciences
University of Hawaii at Manoa
Dissertation/Thesis Title — "Physiological Effects of Environmental Factors and Growth Regulators on Floral Initiation and Development of Pineapple [Ananas Comosus (L.) Merr.]."
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1987
MS, Agronomy
China Agricultural University
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1984
BS, Agronomy
Qingdao Agricultural Universtity
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2023
PLOS
Long Service Award
For over 5 years of dedicated service and commitment to the PLOS ONE Editorial Board
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2013
Youngstown State University
Distiguished Professorship
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2025
"Genome-wide identification and analysis of alternative splicing in Aspergillus niger"
X. Min, C. Jones, B. Logan, M. Campean, B. Wekhyan, C. Dasana, A. Patel, P. Mudiyanselage , K. Adeyemo, F. Yu
Computational Molecular Biology, BioSciPublisher, volume 15, issue 1, p. 1 - 12
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2024
"AQPrius: Offline Approximate Query Processing Enhanced by Error Assessment using Bootstrap Sampling"
F. Yu, S. Maharjan, L. Kerns, X. Min, A. Arslanyilmaz, M. Zhu
International Journal of Computer Science and Security, volume 18, issue 3, p. 30-47
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2024
"Error Assessment for Multi-Join AQP using Bootstrap Sampling"
S. Maharjan, L. Kerns, X. Min, F. Yu
39th International Conference on Computers and Their Applications (CATA'24), volume 98, p. 46-55 -
2023
"Systematic collection and analysis of alternative splicing events in potato plants"
A. Ogungbayi, J. Lee, V. Vaghela, F. Yu, X. Min
Journal of Plant Sciences, volume 11, issue 3, p. 98-106
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2023
"Pistachio genomes provide insights into nut tree domestication and ZW sex chromosome evolution"
S. Kafkas, X. Ma, X. Zhang, .. Min, ..., a. others
Plant Communications, volume 4, issue 4
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2023
"Comparative analysis of alternative splicing events in foliar transcriptomes of potato plants inoculated with Phytophthora infestans"
J. Lee, X. Min
Computational Molecular Biology, volume 13, issue 1, p. 1-8
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2022
"Identification and Analysis of Alternative Splicing in Soybean Plants"
X. Min, T. Kasamias, M. Wagner, A. Ogunbayi, F. Yu
Proceedings of the 14th International Conference on Bioinformatics and Computational Biology, volume 83, p. 1--9 -
2022
"Molecular evolution of genes involved in quinic acid utilization in fungi"
D. Asch, J. Ziegler , X. Min
Computational Molecular Biology, volume 11, issue 5, p. 1-15
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2021
"Advances in transcriptome analyses using RNA sequencing technology in soybean plants [Glycine max]"
X. Min, M. Wagner, T. Kasamias
Computational Molecular Biology, volume 11, issue 1, p. 1-14
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2019
"Expanding alternative splicing identification by integrating multiple sources of transcription data in tomato."
S. Clark, F. Yu , L. Gu , X. Min
Frontiers in Plant Sciences, volume 10:689., issue doi:10.3389/fpls.2019.00689.
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2018
"A survey of alternative splicing in allotetraploid cotton (Gossypium hirsutum L.)"
X. Min
Computational Molecular Biology, volume 8, issue 1, p. 1-13
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2017
"Comprehensive Cataloging and Analysis of Alternative Splicing in Maize"
X. Min
Computational Molecular Biology, volume 7, issue 1, p. 1-11
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2017
"Comparative landscape of alternative splicing in fruit plants"
X. Min
Current Plant Biology, volume 9-10, p. 29-36
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2016
"ProtSecKB: The Protist Secretome and Subcellular Proteome Knowledgebase"
X. Min
Computational Molecular Biology, volume 6, issue 4, p. 1-12
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2016
"Genome-wide identification and analysis of genes encoding proteolytic enzymes in pineapple"
X. Min
Tropical Plant Biology, volume 9, issue 3, p. 161-175
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2016
"Analysis of alternative splicing landscape in pineapple (Ananas comosus)"
X. Min
Tropical Plant Biology, volume 9, issue 3, p. 150-160
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2015
"The pineapple genome and the evolution of CAM photosynthesis"
R. Ming, X. Min, a. others
Nature Genetics, volume 47, issue 12, p. 1435-1442
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2015
"Prediction of plant protein subcellular locations"
K. Neizer-Ashun, F. Yu, J. Meinken, X. Min, G. Chang
Proceedings of the 7th International Conference on Bioinformatics and Computational Biology, BICOB 2015
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2023 - 2023
Reviewer, Journal Article
Scientific journals: PlosOne; Plants, International Journal of Molecular Sciences; 7 articles -
2023 - 2024
Editor, Journal Editor
MDPI Plants -
2015 - 2023
Editor, Journal Editor
PLOSONE -
2012 - 2024
Other
Computational Molecular Biology
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2022 - 2022
Judge
District 15 Lake-to-River Science Day -
2022 - 2022
Judge
YSU QUEST